Package: SignatuR 0.3.0

Massimo Andreatta

SignatuR: Signatures for single-cell data analysis

A database of useful signatures for single-cell data analysis. Query the existing signatures or use it to organize your own gene sets in a hierarchical structure.

Authors:Massimo Andreatta [aut, cre], Paul Gueguen [aut], Santiago Carmona [aut]

SignatuR_0.3.0.tar.gz
SignatuR_0.3.0.zip(r-4.7)SignatuR_0.3.0.zip(r-4.6)SignatuR_0.3.0.zip(r-4.5)
SignatuR_0.3.0.tgz(r-4.6-any)SignatuR_0.3.0.tgz(r-4.5-any)
SignatuR_0.3.0.tar.gz(r-4.7-any)SignatuR_0.3.0.tar.gz(r-4.6-any)
SignatuR_0.3.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
SignatuR/json (API)

# Install 'SignatuR' in R:

install.packages('SignatuR', repos = c('https://carmonalab.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/carmonalab/signatur/issues

Datasets:

SignatuR - A database of gene signatures for single-cell data analysis

On CRAN:

4.23 score 28 stars 61 scripts 6 exports 3 dependencies

Last updated from:e3d02c6208. Checks:9 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	OK	130
source / vignettes	OK	161
linux-release-x86_64	OK	119
macos-release-arm64	OK	82
macos-oldrel-arm64	OK	95
windows-devel	OK	74
windows-release	OK	80
windows-oldrel	OK	71
wasm-release	OK	141

Exports:AddNode AddSignature GetSignature LoadSignatuR RemoveSignature SaveSignatuR

Dependencies:data.tree R6 stringi

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Add node to DB	AddNode
Add signature to DB	AddSignature
Get signatures from DB	GetSignature
Load SignatuR from local file	LoadSignatuR
Remove signature from DB	RemoveSignature
Save a local copy of SignatuR	SaveSignatuR
A database of gene signatures for single-cell data analysis	SignatuR